Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BARCL_0293Homologs of previously reported genes of unknown function. (198 aa)    
Predicted Functional Partners:
BARCL_0294
Homologs of previously reported genes of unknown function.
 
     0.841
BARCL_0211
Homologs of previously reported genes of unknown function.
  
     0.765
BARCL_0292
Homologs of previously reported genes of unknown function.
       0.753
BARCL_0681
Homologs of previously reported genes of unknown function.
  
     0.720
BARCL_0297
Homologs of previously reported genes of unknown function.
  
     0.715
BARCL_0296
Homologs of previously reported genes of unknown function.
  
     0.713
BARCL_0435
Homologs of previously reported genes of unknown function.
  
     0.700
BARCL_0674
Homologs of previously reported genes of unknown function.
  
     0.698
BARCL_1228
Homologs of previously reported genes of unknown function.
  
     0.658
BARCL_1247
Homologs of previously reported genes of unknown function.
  
     0.656
Your Current Organism:
Bartonella clarridgeiae
NCBI taxonomy Id: 696125
Other names: B. clarridgeiae 73, Bartonella clarridgeiae 73, Bartonella clarridgeiae str. 73, Bartonella clarridgeiae strain 73
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