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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (440 aa)    
Predicted Functional Partners:
omp-2
Outer membrane lipoprotein omp16 homolog precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.958
tolQ
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.892
tolR
TolR protein.
 
  
 0.848
tolA
TolA protein.
   
 
 0.846
BARCL_1250
Homologs of previously reported genes of unknown function.
  
 
 0.789
BARCL_0408
Omp43; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
    
 
 0.689
comL
Competence lipoprotein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.623
BARCL_1333
Homologs of previously reported genes of unknown function.
  
 
 0.606
exbB
Biopolymer transport exbB protein.
 
  
 0.591
tonB
Fragment of outer membrane heme receptor (part 1).
   
 
 0.577
Your Current Organism:
Bartonella clarridgeiae
NCBI taxonomy Id: 696125
Other names: B. clarridgeiae 73, Bartonella clarridgeiae 73, Bartonella clarridgeiae str. 73, Bartonella clarridgeiae strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.