STRINGSTRING
midi_00700 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00700" - Putative type IV secretion system protein in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00700Putative type IV secretion system protein (699 aa)    
Predicted Functional Partners:
midi_00701
Type IV secretion system protein (469 aa)
 
   
0.986
midi_00788
Putative type IV secretion system protein (852 aa)
 
   
0.937
virB8
Type IV secretion system protein VirB8 (235 aa)
 
     
  0.813
midi_01214
Hypothetical protein (92 aa)
   
          0.776
virD4
Type IV secretion system protein VirD4 (461 aa)
 
     
  0.724
midi_00576
Intradiol ring-cleavage dioxygenase (209 aa)
 
          0.703
midi_00702
Hypothetical protein (488 aa)
              0.619
virB9
Type IV secretion system protein VirB9 (237 aa)
 
     
  0.605
midi_00895
Putative type IV secretion system protein (259 aa)
 
     
  0.594
virB4
Type IV secretion system protein VirB4 (748 aa)
 
     
  0.579
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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