STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58342.1KEGG: dae:Dtox_0495 hypothetical protein. (480 aa)    
Predicted Functional Partners:
AEG58341.1
KEGG: dhd:Dhaf_1669 RND family efflux transporter MFP subunit.
 
 
 0.984
AEG58344.1
PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_0497 extracellular solute-binding protein family 1.
 
    0.920
AEG58343.1
KEGG: dae:Dtox_0496 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase.
 
     0.833
AEG58340.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dae:Dtox_0493 binding-protein-dependent transport systems inner membrane component.
 
    0.823
AEG60776.1
KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.789
AEG58339.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_1667 binding-protein-dependent transport systems inner membrane component.
 
    0.772
AEG58740.1
KEGG: dae:Dtox_3545 small membrane protein.
  
     0.759
AEG61699.1
KEGG: dae:Dtox_4247 hypothetical protein.
  
     0.741
AEG60300.1
PFAM: protein of unknown function DUF867; KEGG: dsy:DSY4392 hypothetical protein.
  
     0.732
AEG60157.1
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: drm:Dred_1958 ribosomal protein L7Ae/L30e/S12e/Gadd45.
   
    0.689
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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