STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58384.1PFAM: Aldehyde Dehydrogenase; KEGG: bmq:BMQ_3643 aldehyde dehydrogenase (NAD) family protein. (473 aa)    
Predicted Functional Partners:
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.901
AEG58904.1
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: drm:Dred_1495 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.715
AEG58383.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: pca:Pcar_2847 alcohol dehydrogenase, class IV.
 
  
 0.679
AEG62055.1
PFAM: oxidoreductase domain protein; KEGG: cma:Cmaq_1495 oxidoreductase domain-containing protein.
   
  
 0.661
AEG60657.1
PFAM: PfkB domain protein; KEGG: tpd:Teth39_1972 ribokinase-like domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.566
AEG61342.1
PFAM: PfkB domain protein; KEGG: ppp:PHYPADRAFT_121587 hypothetical protein; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.566
AEG61351.1
PFAM: PfkB domain protein; KEGG: toc:Toce_1876 PfkB domain protein.
  
  
 0.566
AEG62021.1
PFAM: PfkB domain protein; KEGG: hor:Hore_22680 PfkB domain protein.
  
  
 0.566
AEG60716.1
PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.509
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.486
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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