STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58388.1KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein. (386 aa)    
Predicted Functional Partners:
AEG58387.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
 
  
  0.994
AEG58885.1
KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
  
  
 
0.900
AEG59959.1
KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
  
  
 
0.900
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
  0.900
AEG58886.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
 
     0.782
AEG59958.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
 
     0.782
AEG59964.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
 
     0.782
AEG58386.1
KEGG: dhd:Dhaf_4412 malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.565
AEG58389.1
PFAM: major facilitator superfamily MFS_1; KEGG: bmq:BMQ_3321 transporter major facilitator superfamily.
  
    0.494
AEG58385.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mrb:Mrub_2461 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein.
  
   0.490
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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