STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58389.1PFAM: major facilitator superfamily MFS_1; KEGG: bmq:BMQ_3321 transporter major facilitator superfamily. (477 aa)    
Predicted Functional Partners:
AEG58760.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_5948 major facilitator transporter.
  
  
 0.617
AEG58390.1
2-hydroxy-3-oxopropionate reductase; KEGG: dba:Dbac_2146 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding.
       0.570
AEG58388.1
KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
  
    0.494
AEG58387.1
PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein.
       0.480
AEG61097.1
PFAM: amino acid permease-associated region; KEGG: clj:CLJU_c16020 putative aminoacid permease.
  
   
 0.452
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.