STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58402.1Pyruvate/ketoisovalerate oxidoreductase, gamma subunit; KEGG: drm:Dred_0049 pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain. (188 aa)    
Predicted Functional Partners:
AEG58401.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: drm:Dred_0048 thiamine pyrophosphate binding domain-containing protein.
 
 
 0.986
AEG58400.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: drm:Dred_0047 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
 
 
 0.967
AEG61257.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: hor:Hore_06790 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit.
 
 
 0.936
AEG58403.1
KEGG: drm:Dred_2822 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.933
AEG59584.1
TIGRFAM: isocitrate dehydrogenase, NAD-dependent; KEGG: pth:PTH_2517 isocitrate/isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
     
 0.900
AEG61258.1
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: adg:Adeg_1385 2-ketoisovalerate ferredoxin reductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
 
 
 0.896
AEG58399.1
KEGG: drm:Dred_0046 hypothetical protein.
 
     0.880
AEG61259.1
Ferredoxin; KEGG: pth:PTH_1204 ferredoxin.
 
 
 0.825
AEG58842.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ttr:Tter_0805 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.823
AEG60521.1
2-oxoglutarate synthase; KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.
 
 
 0.821
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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