STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58428.1PFAM: protein of unknown function DUF77; KEGG: tjr:TherJR_0062 protein of unknown function DUF77. (95 aa)    
Predicted Functional Partners:
AEG58430.1
KEGG: drm:Dred_3204 membrane lipoprotein lipid attachment site.
 
    0.951
AEG58429.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0063 binding-protein-dependent transport systems inner membrane component.
 
    0.945
AEG58431.1
KEGG: rop:ROP_13040 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.791
AEG58427.1
KEGG: dae:Dtox_1795 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein.
       0.790
AEG58432.1
KEGG: drm:Dred_0071 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.
  
    0.429
AEG58426.1
PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; KEGG: drm:Dred_0070 3D domain-containing protein.
       0.418
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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