STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58429.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0063 binding-protein-dependent transport systems inner membrane component. (252 aa)    
Predicted Functional Partners:
AEG58430.1
KEGG: drm:Dred_3204 membrane lipoprotein lipid attachment site.
  
 0.987
AEG58431.1
KEGG: rop:ROP_13040 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.972
AEG58428.1
PFAM: protein of unknown function DUF77; KEGG: tjr:TherJR_0062 protein of unknown function DUF77.
 
    0.945
AEG59133.1
SMART: extracellular solute-binding protein family 3; KEGG: slp:Slip_1328 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein.
 
  
 0.842
AEG59131.1
KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.832
AEG58872.1
KEGG: dvm:DvMF_0522 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.812
AEG58427.1
KEGG: dae:Dtox_1795 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein.
 
     0.771
AEG61439.1
KEGG: mta:Moth_0098 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.762
AEG58868.1
KEGG: dvm:DvMF_0518 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.757
AEG58869.1
SMART: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0519 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
 
  
 0.743
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.