STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58449.1KEGG: drm:Dred_0080 hypothetical protein. (334 aa)    
Predicted Functional Partners:
AEG59206.1
KEGG: drm:Dred_2686 beta-lactamase domain-containing protein.
   
   0.818
AEG61803.1
KEGG: drm:Dred_2993 beta-lactamase domain-containing protein.
   
   0.818
AEG58801.1
NADH dehydrogenase (quinone); KEGG: pth:PTH_1378 NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
    0.726
AEG60634.1
KEGG: drm:Dred_1655 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
    0.726
AEG61315.1
KEGG: dau:Daud_0994 N-terminal methylation protein.
  
     0.722
AEG58448.1
KEGG: drm:Dred_0079 peptidase U57, YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG.
       0.646
AEG58451.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
     0.634
AEG60196.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.629
AEG60391.1
KEGG: slp:Slip_1884 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein.
  
     0.602
AEG61152.1
KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.593
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.