STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58476.1PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0107 PRC-barrel domain-containing protein. (315 aa)    
Predicted Functional Partners:
AEG60202.1
KEGG: drm:Dred_1918 hypothetical protein.
  
     0.765
AEG61514.1
KEGG: drm:Dred_0711 hypothetical protein.
  
     0.685
AEG59196.1
KEGG: drm:Dred_2696 hypothetical protein.
  
     0.684
AEG60413.1
KEGG: pth:PTH_1837 hypothetical protein.
  
     0.615
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
  
     0.603
AEG59191.1
KEGG: dae:Dtox_2083 DSH domain protein; PFAM: DSH domain protein; helicase domain protein; SMART: helicase domain protein.
  
     0.578
AEG60208.1
KEGG: drm:Dred_1912 hypothetical protein.
  
     0.558
AEG59309.1
KEGG: drm:Dred_2533 signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.554
AEG61375.1
KEGG: drm:Dred_0767 hypothetical protein.
 
    0.540
AEG61173.1
PFAM: HutP family protein; KEGG: drm:Dred_1145 hypothetical protein.
  
     0.526
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.