STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58486.1KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. (315 aa)    
Predicted Functional Partners:
AEG61152.1
KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
  
 0.763
AEG58489.1
KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
 
   
 0.723
AEG61153.1
PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
  
     0.660
AEG61144.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.641
AEG60038.1
Manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: dae:Dtox_4220 IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.621
AEG60104.1
SMART: AAA ATPase; KEGG: drm:Dred_2013 AAA ATPase.
  
    0.621
AEG58485.1
KEGG: drm:Dred_0116 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
       0.601
AEG59405.1
KEGG: drm:Dred_2503 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
  
 0.590
AEG58479.1
KEGG: drm:Dred_0110 hypothetical protein.
 
     0.569
AEG58484.1
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.491
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.