STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58490.1KEGG: drm:Dred_0119 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like. (179 aa)    
Predicted Functional Partners:
AEG58489.1
KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
 
  
 0.959
AEG58492.1
PFAM: Septum formation initiator; KEGG: drm:Dred_0121 septum formation initiator.
 
    0.792
AEG60710.1
Sporulation protein YtxC; KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC.
  
     0.761
AEG58485.1
KEGG: drm:Dred_0116 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.710
AEG61540.1
Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.678
AEG61821.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3069 PDZ/DHR/GLGF domain-containing protein.
  
     0.659
AEG62069.1
KEGG: drm:Dred_3295 hypothetical protein.
  
     0.643
AEG58495.1
SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: drm:Dred_0124 phosphoprotein phosphatase; PFAM: Stage II sporulation protein E.
 
     0.635
AEG58484.1
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
    0.612
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.603
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.