STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58745.1KEGG: pca:Pcar_0865 hypothetical protein. (315 aa)    
Predicted Functional Partners:
AEG58747.1
KEGG: dae:Dtox_2669 hypothetical protein.
 
     0.867
AEG58743.1
KEGG: dau:Daud_0720 hypothetical protein.
 
     0.829
AEG58751.1
KEGG: dae:Dtox_2665 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
 
 
 0.810
AEG58753.1
PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2664 type II secretion system protein.
 
  
 0.787
AEG58744.1
Hypothetical protein.
       0.709
AEG61323.1
KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
 
 0.678
AEG58746.1
KEGG: dae:Dtox_3371 O-antigen polymerase.
 
   
 0.649
AEG61321.1
PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein.
  
  
 0.647
AEG59338.1
KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
  
  
 0.640
AEG58742.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.635
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.