STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58756.1SMART: AAA ATPase; KEGG: bbe:BBR47_42920 hypothetical protein. (243 aa)    
Predicted Functional Partners:
AEG58755.1
KEGG: dhd:Dhaf_2879 hypothetical protein.
       0.773
AEG58754.1
KEGG: csc:Csac_1494 hypothetical protein.
       0.668
AEG58757.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: mta:Moth_1911 iron-containing alcohol dehydrogenase.
       0.415
AEG58752.1
KEGG: mpi:Mpet_0661 hypothetical protein.
       0.406
AEG58753.1
PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2664 type II secretion system protein.
       0.406
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.