STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58763.1KEGG: drm:Dred_1233 hypothetical protein. (116 aa)    
Predicted Functional Partners:
AEG58762.1
TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_2752 glycyl-radical activating family protein; PFAM: Radical SAM domain protein.
       0.773
htpG
Heat shock protein Hsp90-like protein; Molecular chaperone. Has ATPase activity.
   
   0.747
AEG58761.1
KEGG: drm:Dred_2750 formate C-acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
       0.561
AEG60892.1
TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: drm:Dred_1352 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein.
    
   0.479
AEG61936.1
PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit.
  
     0.424
AEG58764.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_2748 hypothetical protein.
       0.416
AEG61717.1
PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit.
  
     0.412
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.