STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58788.1KEGG: cdl:CDR20291_0862 predicted abc transporter, atpase component; PFAM: ABC transporter related; SMART: AAA ATPase. (227 aa)    
Predicted Functional Partners:
AEG58787.1
PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein.
 
 
 0.991
AEG60778.1
PFAM: protein of unknown function DUF214; KEGG: hmo:HM1_3093 hypothetical protein.
 
 0.940
AEG58908.1
PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein.
 
 0.937
AEG59216.1
PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein.
 
 0.840
AEG59779.1
PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein.
 
 0.811
AEG60914.1
PFAM: protein of unknown function DUF214; KEGG: dhd:Dhaf_2149 protein of unknown function DUF214.
 
 
 0.803
AEG58789.1
KEGG: cdl:CDR20291_0861 sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
     0.801
AEG60776.1
KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.710
AEG58790.1
Response regulator receiver; KEGG: cdl:CDR20291_0860 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
     0.670
AEG58342.1
KEGG: dae:Dtox_0495 hypothetical protein.
  
 
 0.555
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.