STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58796.1PFAM: TfoX domain-containing protein; KEGG: mru:mru_1848 TfoX C-terminal domain-containing protein. (84 aa)    
Predicted Functional Partners:
AEG59904.1
KEGG: drm:Dred_2147 hypothetical protein.
    
   0.692
AEG60784.1
PFAM: Silent information regulator protein Sir2; KEGG: drm:Dred_2032 silent information regulator protein Sir2.
   
   0.692
AEG58914.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bth:BT_1384 hypothetical protein.
  
     0.665
AEG58794.1
TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: cdf:CD3283 putative pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein.
       0.642
AEG58795.1
KEGG: cdl:CDR20291_3143 putative formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
       0.642
AEG59212.1
KEGG: cce:Ccel_2418 hypothetical protein.
  
     0.556
AEG59805.1
KEGG: cbh:CLC_1080 hypothetical protein.
 
     0.525
AEG60325.1
Regulatory protein MerR; KEGG: dhd:Dhaf_3149 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
     0.499
AEG60323.1
PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3151 ABC-2 type transporter.
  
     0.487
hisI
phosphoribosyl-ATP diphosphatase; KEGG: drm:Dred_2349 phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; In the N-terminal section; belongs to the PRA-CH family.
       0.454
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.