STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58847.1KEGG: drm:Dred_2960 hypothetical protein. (109 aa)    
Predicted Functional Partners:
AEG58848.1
KEGG: drm:Dred_2959 hypothetical protein.
 
  
 0.972
AEG60801.1
PFAM: protein of unknown function DUF1657; KEGG: aac:Aaci_0718 protein of unknown function DUF1657.
  
     0.752
AEG61200.1
PFAM: protein of unknown function DUF1657; KEGG: mta:Moth_1787 hypothetical protein.
  
     0.721
AEG60802.1
PFAM: protein of unknown function DUF1657; KEGG: drm:Dred_1467 hypothetical protein.
  
     0.715
AEG60732.1
Sporulation protein YtaF; Probably functions as a manganese efflux pump.
  
     0.691
AEG61297.1
KEGG: drm:Dred_1060 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
  
     0.644
AEG61819.1
KEGG: drm:Dred_3068 hypothetical protein.
  
     0.619
AEG60587.1
PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter.
  
    0.582
AEG61248.1
KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
     0.579
AEG61355.1
KEGG: drm:Dred_0906 hypothetical protein.
  
     0.571
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.