STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58850.1KEGG: drm:Dred_2201 hypothetical protein. (731 aa)    
Predicted Functional Partners:
AEG61264.1
PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; KEGG: drm:Dred_1088 thiamin pyrophosphokinase, catalytic region.
 
     0.779
AEG61263.1
KEGG: drm:Dred_1089 hypothetical protein.
 
     0.778
AEG61252.1
KEGG: drm:Dred_1093 hypothetical protein.
  
     0.774
AEG61261.1
KEGG: drm:Dred_1091 hypothetical protein.
  
     0.774
AEG61262.1
PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1090 glycosyl transferase family protein.
 
     0.773
AEG59062.1
KEGG: bld:BLi02545 hypothetical protein.
  
     0.665
AEG58849.1
KEGG: pth:PTH_2207 amino acid transporters.
       0.661
AEG59128.1
KEGG: cac:CA_C0449 hypothetical protein.
  
     0.646
AEG60667.1
Sporulation protein YunB; KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like.
  
     0.598
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.585
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.