STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58860.1PFAM: VanZ family protein; KEGG: drm:Dred_2961 hypothetical protein. (155 aa)    
Predicted Functional Partners:
AEG58861.1
PFAM: protein of unknown function DUF218; KEGG: tjr:TherJR_1014 protein of unknown function DUF218.
       0.773
AEG58862.1
KEGG: dae:Dtox_2271 hypothetical protein.
       0.705
AEG61213.1
PFAM: CRISPR-associated protein TM1802; KEGG: drm:Dred_0536 hypothetical protein.
  
     0.602
AEG59140.1
KEGG: drm:Dred_2743 hypothetical protein.
  
     0.581
AEG60940.1
PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein.
  
     0.570
AEG59622.1
PFAM: TrkA-C domain protein; KEGG: drm:Dred_2318 TrkA domain-containing protein.
  
     0.557
AEG58863.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase.
       0.556
AEG61121.1
PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein.
  
     0.546
AEG60058.1
PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator.
  
     0.544
AEG58859.1
KEGG: dau:Daud_1553 hypothetical protein.
       0.526
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.