STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58862.1KEGG: dae:Dtox_2271 hypothetical protein. (225 aa)    
Predicted Functional Partners:
AEG58860.1
PFAM: VanZ family protein; KEGG: drm:Dred_2961 hypothetical protein.
       0.705
AEG58861.1
PFAM: protein of unknown function DUF218; KEGG: tjr:TherJR_1014 protein of unknown function DUF218.
       0.705
AEG58863.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase.
       0.586
AEG58859.1
KEGG: dau:Daud_1553 hypothetical protein.
       0.484
AEG58864.1
PFAM: transcriptional regulator PadR family protein; KEGG: dau:Daud_0311 PadR-like family transcriptional regulator.
       0.418
AEG58865.1
KEGG: dau:Daud_0310 ABC-transporter-like protein, periplasmic substrate-binding protein.
       0.408
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.