STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58907.1KEGG: dae:Dtox_1572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (244 aa)    
Predicted Functional Partners:
AEG58908.1
PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein.
 
 0.994
AEG60778.1
PFAM: protein of unknown function DUF214; KEGG: hmo:HM1_3093 hypothetical protein.
 
 0.984
AEG59216.1
PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein.
 
 0.964
AEG59779.1
PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein.
 
 0.958
AEG58906.1
KEGG: drm:Dred_2928 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.948
AEG60776.1
KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.898
AEG58787.1
PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein.
 
 
 0.886
AEG59778.1
KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.837
AEG59215.1
KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein.
 
 
 0.833
AEG58882.1
KEGG: drm:Dred_2954 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.656
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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