STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58918.1PFAM: Methyltransferase type 11; KEGG: dhd:Dhaf_1942 methyltransferase type 11. (241 aa)    
Predicted Functional Partners:
AEG60764.1
KEGG: cce:Ccel_3349 hypothetical protein.
  
     0.621
AEG61727.1
KEGG: dhd:Dhaf_2005 zinc finger SWIM domain protein.
  
     0.618
AEG60763.1
PFAM: Collagen triple helix repeat-containing protein; KEGG: dhd:Dhaf_1008 collagen triple helix repeat protein.
  
     0.589
AEG60027.1
Hypothetical protein; KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein.
  
     0.476
AEG58876.1
PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0472 hypothetical protein.
  
     0.455
AEG60034.1
KEGG: mca:MCA2948 prophage MuMc02, host-nuclease inhibitor protein.
  
     0.426
AEG60771.1
TIGRFAM: Exosporium BclB-like; KEGG: aac:Aaci_2505 collagen triple helix repeat protein.
  
     0.407
AEG58330.1
KEGG: art:Arth_2195 hypothetical protein.
 
     0.403
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.