STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58923.1KEGG: drm:Dred_2918 hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family. (186 aa)    
Predicted Functional Partners:
AEG58968.1
KEGG: drm:Dred_0837 hypothetical protein.
  
     0.605
AEG58924.1
PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein.
 
     0.569
AEG61585.1
PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_0632 hypothetical protein.
  
     0.499
AEG59904.1
KEGG: drm:Dred_2147 hypothetical protein.
  
     0.493
AEG59970.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.448
AEG61670.1
KEGG: drm:Dred_0444 hypothetical protein.
  
     0.439
AEG60896.1
PFAM: Uncharacterised protein family UPF0302, N-terminal; Uncharacterised protein family UPF0302, C-terminal; KEGG: drm:Dred_1347 hypothetical protein.
  
     0.433
AEG61121.1
PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein.
  
     0.400
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.