STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58950.1KEGG: adg:Adeg_0789 hypothetical protein. (185 aa)    
Predicted Functional Partners:
AEG58949.1
PFAM: Type II secretion system F domain; KEGG: nth:Nther_2314 type II secretion system protein.
       0.732
AEG58951.1
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mta:Moth_1550 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A.
       0.705
AEG58947.1
PFAM: type II secretion system protein E; KEGG: bbe:BBR47_05700 hypothetical protein.
       0.689
AEG58948.1
PFAM: Type II secretion system F domain; KEGG: aco:Amico_1198 type II secretion system F domain protein.
       0.689
AEG58952.1
Hypothetical protein; KEGG: ere:EUBREC_1143 methyl-accepting chemotaxis protein.
       0.656
AEG58946.1
Hypothetical protein; KEGG: adg:Adeg_0779 chromosome partitioning ATPase.
       0.653
AEG58942.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drm:Dred_0799 diguanylate cyclase; SMART: GGDEF domain containing protein.
       0.631
AEG58943.1
KEGG: drm:Dred_0800 chromosome partitioning ATPase protein-like protein.
       0.631
AEG58944.1
KEGG: drm:Dred_0801 hypothetical protein.
       0.631
AEG58945.1
PFAM: SAF domain protein; KEGG: drm:Dred_0804 hypothetical protein.
       0.631
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.