STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58968.1KEGG: drm:Dred_0837 hypothetical protein. (176 aa)    
Predicted Functional Partners:
AEG58969.1
KEGG: adg:Adeg_0813 hypothetical protein.
 
     0.924
AEG58967.1
EAL domain protein; KEGG: drm:Dred_0836 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
       0.782
AEG61852.1
KEGG: drm:Dred_3104 hypothetical protein.
  
     0.752
AEG61121.1
PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein.
  
     0.664
AEG60058.1
PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator.
  
     0.650
AEG60932.1
PFAM: glutaredoxin; KEGG: drm:Dred_1319 hypothetical protein.
  
     0.629
AEG60218.1
KEGG: drm:Dred_1904 hypothetical protein.
  
     0.625
AEG60716.1
PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.613
AEG61213.1
PFAM: CRISPR-associated protein TM1802; KEGG: drm:Dred_0536 hypothetical protein.
  
     0.607
AEG58923.1
KEGG: drm:Dred_2918 hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.605
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.