STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG58974.1KEGG: drm:Dred_0840 hypothetical protein. (153 aa)    
Predicted Functional Partners:
AEG58973.1
Hypothetical protein; Manually curated; KEGG: drm:Dred_0839 hypothetical protein.
       0.781
AEG58977.1
PFAM: TRAG family protein; KEGG: drm:Dred_0843 TraG family protein.
       0.452
AEG58976.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0842 membrane-bound metal-dependent hydrolase.
       0.434
AEG58975.1
KEGG: drm:Dred_0841 hypothetical protein.
       0.432
AEG58978.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase.
       0.423
AEG58979.1
KEGG: drm:Dred_0845 RNA-binding S1 domain-containing protein.
       0.415
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.