STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59001.1Helix-turn-helix domain protein; KEGG: clj:CLJU_c00220 putative phage protein with HTH motif; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (71 aa)    
Predicted Functional Partners:
AEG59000.1
Helix-turn-helix domain protein; KEGG: drm:Dred_0889 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
    0.623
AEG59003.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_0893 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
     
 0.541
AEG59002.1
KEGG: drm:Dred_0892 cobyrinic acid a,c-diamide synthase.
       0.525
AEG59196.1
KEGG: drm:Dred_2696 hypothetical protein.
  
     0.520
AEG59004.1
KEGG: drm:Dred_0895 hypothetical protein.
       0.508
AEG61803.1
KEGG: drm:Dred_2993 beta-lactamase domain-containing protein.
 
     0.479
AEG59005.1
KEGG: pdi:BDI_0889 hypothetical protein.
       0.411
AEG61514.1
KEGG: drm:Dred_0711 hypothetical protein.
  
     0.409
AEG61470.1
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit.
       0.407
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.