STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59007.1PFAM: Resolvase domain; Recombinase; KEGG: dae:Dtox_2966 resolvase domain protein. (552 aa)    
Predicted Functional Partners:
AEG60021.1
KEGG: btr:Btr_2621 hypothetical protein.
   
    0.626
AEG61978.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.484
AEG59803.1
Hypothetical protein; KEGG: dae:Dtox_2731 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
    0.477
AEG61975.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.476
AEG61762.1
KEGG: hmo:HM1_2946 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.454
AEG61205.1
KEGG: drm:Dred_0322 Fis family transcriptional regulator.
  
     0.434
AEG61987.1
KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein.
  
     0.427
AEG59140.1
KEGG: drm:Dred_2743 hypothetical protein.
  
     0.425
AEG58527.1
KEGG: dae:Dtox_1632 hypothetical protein.
  
     0.409
AEG60404.1
KEGG: dae:Dtox_0339 hypothetical protein.
  
    0.405
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.