STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59008.1PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase. (55 aa)    
Predicted Functional Partners:
AEG59009.1
KEGG: drm:Dred_2908 spore coat peptide assembly protein cotJB.
 
  
 0.977
AEG58929.1
PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase.
  
     0.736
AEG59010.1
KEGG: drm:Dred_2907 hypothetical protein.
  
    0.731
AEG61144.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.539
AEG59943.1
KEGG: drm:Dred_2101 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
  
 0.427
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: drm:Dred_2902 glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.419
AEG60747.1
KEGG: amt:Amet_4659 hypothetical protein.
 
    0.412
AEG61540.1
Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
     0.400
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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