STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59016.1KEGG: drm:Dred_2897 hypothetical protein. (124 aa)    
Predicted Functional Partners:
AEG60217.1
KEGG: drm:Dred_1905 hypothetical protein.
  
     0.770
AEG59523.1
KEGG: drm:Dred_2397 hypothetical protein.
  
     0.764
AEG58451.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.739
AEG59015.1
PFAM: GCN5-related N-acetyltransferase; KEGG: drm:Dred_2898 acetyltransferase; Belongs to the acetyltransferase family.
       0.737
AEG58977.1
PFAM: TRAG family protein; KEGG: drm:Dred_0843 TraG family protein.
  
     0.675
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
  
     0.674
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
  
     0.672
AEG59658.1
PFAM: thiamineS protein; KEGG: drm:Dred_2272 hypothetical protein.
  
     0.651
AEG59484.1
KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.649
AEG58398.1
KEGG: drm:Dred_0045 hypothetical protein; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA.
  
     0.634
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.