STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59020.1PFAM: peptidase C26; KEGG: drm:Dred_2893 peptidase C26. (232 aa)    
Predicted Functional Partners:
AEG60205.1
KEGG: drm:Dred_1915 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase.
     0.923
AEG59021.1
PFAM: amidohydrolase; KEGG: drm:Dred_2892 amidohydrolase.
       0.805
AEG59018.1
KEGG: drm:Dred_2895 CopG family transcriptional regulator.
       0.745
AEG59019.1
PemK family protein; Toxic component of a type II toxin-antitoxin (TA) system.
       0.742
AEG59750.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
 
      0.621
AEG60987.1
PFAM: protein of unknown function DUF156; KEGG: ckr:CKR_0067 hypothetical protein.
   
    0.612
AEG60379.1
KEGG: gka:GK2895 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
  
 0.531
AEG59022.1
KEGG: drm:Dred_2891 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.516
AEG61601.1
Cupin 2 conserved barrel domain protein; KEGG: nth:Nther_2571 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
  
 0.511
AEG58734.1
PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: drm:Dred_2810 glutamate--ammonia ligase.
  
  
 0.484
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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