STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59021.1PFAM: amidohydrolase; KEGG: drm:Dred_2892 amidohydrolase. (383 aa)    
Predicted Functional Partners:
AEG59020.1
PFAM: peptidase C26; KEGG: drm:Dred_2893 peptidase C26.
       0.805
AEG61446.1
PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: hmo:HM1_0674 nad dependent epimerase/dehydratase family protein.
  
    0.679
AEG62010.1
Arginase; KEGG: dhd:Dhaf_0755 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
  
 0.619
AEG59018.1
KEGG: drm:Dred_2895 CopG family transcriptional regulator.
       0.611
AEG59019.1
PemK family protein; Toxic component of a type II toxin-antitoxin (TA) system.
       0.609
AEG59022.1
KEGG: drm:Dred_2891 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.570
AEG60205.1
KEGG: drm:Dred_1915 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase.
 
     0.526
AEG59023.1
PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: drm:Dred_2888 hypothetical protein.
       0.442
AEG59025.1
TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: drm:Dred_2886 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase.
       0.420
AEG59017.1
KEGG: drm:Dred_2896 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein.
       0.415
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.