STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59056.1KEGG: dhd:Dhaf_2143 hypothetical protein. (218 aa)    
Predicted Functional Partners:
AEG59055.1
KEGG: dae:Dtox_1722 hypothetical protein.
      0.865
AEG59054.1
Hypothetical protein; KEGG: sli:Slin_2704 peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.688
AEG60302.1
KEGG: cce:Ccel_1657 hypothetical protein.
  
     0.647
AEG61593.1
KEGG: dsy:DSY0724 hypothetical protein.
  
     0.600
AEG58341.1
KEGG: dhd:Dhaf_1669 RND family efflux transporter MFP subunit.
  
     0.570
AEG60300.1
PFAM: protein of unknown function DUF867; KEGG: dsy:DSY4392 hypothetical protein.
  
     0.513
AEG59711.1
KEGG: dhd:Dhaf_2195 hypothetical protein.
  
     0.496
AEG58344.1
PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_0497 extracellular solute-binding protein family 1.
  
    0.487
AEG59053.1
ATP-binding region ATPase domain protein; KEGG: gym:GYMC10_3131 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
 
     0.481
AEG59325.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
  
     0.476
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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