STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59062.1KEGG: bld:BLi02545 hypothetical protein. (171 aa)    
Predicted Functional Partners:
AEG58778.1
KEGG: ttm:Tthe_0084 hypothetical protein.
  
     0.688
AEG58850.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.665
AEG59820.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.653
AEG60667.1
Sporulation protein YunB; KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like.
  
     0.640
AEG61153.1
PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
 
     0.534
AEG61261.1
KEGG: drm:Dred_1091 hypothetical protein.
  
     0.533
AEG61252.1
KEGG: drm:Dred_1093 hypothetical protein.
  
     0.519
AEG61264.1
PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; KEGG: drm:Dred_1088 thiamin pyrophosphokinase, catalytic region.
  
     0.519
AEG61151.1
KEGG: drm:Dred_1157 hypothetical protein.
 
     0.511
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.477
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.