STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59073.1PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_3405 polysaccharide deacetylase, putative. (232 aa)    
Predicted Functional Partners:
AEG59074.1
KEGG: drm:Dred_2855 hypothetical protein.
       0.543
AEG59072.1
TIGRFAM: metal dependent phophohydrolase; PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: drm:Dred_2856 putative PAS/PAC sensor protein; SMART: metal-dependent phosphohydrolase HD region.
       0.471
AEG59859.1
PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2190 glycosyl transferase family 2.
 
  
 0.464
AEG60188.1
PFAM: General secretory system II protein E domain protein; KEGG: ele:Elen_1600 bacteriophage N4 adsorption protein B.
  
  
 0.463
AEG60752.1
PFAM: glycosyl transferase family 2; KEGG: nca:Noca_0721 general secretion pathway protein E.
  
  
 0.463
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.