STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59076.1PFAM: FMN-binding domain protein; S-layer domain-containing protein; KEGG: cce:Ccel_2338 hypothetical protein. (1736 aa)    
Predicted Functional Partners:
AEG59077.1
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
  
  
 0.622
AEG59079.1
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: ctc:CTC01025 heptaprenyl diphosphate synthase component I.
 
     0.522
AEG59861.1
PFAM: ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_1601 signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.507
AEG59078.1
PFAM: protein of unknown function DUF1312; KEGG: clj:CLJU_c11430 hypothetical protein.
       0.500
AEG59871.1
PFAM: GCN5-related N-acetyltransferase; KEGG: dal:Dalk_4393 GCN5-related N-acetyltransferase.
  
     0.497
AEG59097.1
PFAM: S-layer domain-containing protein; KEGG: swo:Swol_1184 hypothetical protein.
  
     0.493
AEG61235.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein.
  
     0.481
AEG60397.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: adg:Adeg_1644 copper amine oxidase domain protein.
  
    0.456
AEG59722.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein.
  
     0.450
AEG61755.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cth:Cthe_0824 copper amine oxidase-like protein.
  
     0.442
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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