STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59106.1KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. (1536 aa)    
Predicted Functional Partners:
AEG58810.1
PFAM: amine oxidase; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pth:PTH_0680 hypothetical protein.
 
 
 0.999
AEG58842.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ttr:Tter_0805 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
AEG59107.1
KEGG: drm:Dred_2804 glutamate synthases, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 0.999
AEG60924.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: drm:Dred_1327 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 
 0.999
AEG61286.1
Manually curated; TIGRFAM: glutamate synthase (NADPH), homotetrameric; KEGG: drm:Dred_1071 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 0.999
AEG61407.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.999
AEG59105.1
KEGG: drm:Dred_2806 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
  
 
 0.992
AEG59104.1
TIGRFAM: glutamine synthetase, type I; KEGG: drm:Dred_2807 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
  
 
 0.990
AEG58734.1
PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: drm:Dred_2810 glutamate--ammonia ligase.
  
 
 0.988
carB
KEGG: drm:Dred_0275 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Belongs to the CarB family.
  
 
 0.981
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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