STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59119.1KEGG: dsy:DSY2713 hypothetical protein. (244 aa)    
Predicted Functional Partners:
AEG59120.1
KEGG: dhd:Dhaf_3871 hypothetical protein.
   
 0.985
AEG59121.1
KEGG: dsy:DSY2711 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.954
AEG59123.1
KEGG: dhd:Dhaf_3868 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
     0.925
AEG59122.1
Response regulator receiver; KEGG: dhd:Dhaf_3869 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
     0.757
AEG60914.1
PFAM: protein of unknown function DUF214; KEGG: dhd:Dhaf_2149 protein of unknown function DUF214.
  
     0.589
AEG60844.1
PFAM: protein of unknown function DUF107; KEGG: dhd:Dhaf_3316 protein of unknown function DUF107.
  
     0.548
AEG58787.1
PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein.
  
     0.478
AEG58357.1
KEGG: bsu:BSU26710 branched-chain amino acid transporter; TIGRFAM: branched-chain amino acid transporter, AzlC; PFAM: AzlC family protein.
  
     0.471
AEG61728.1
KEGG: dhd:Dhaf_0677 hypothetical protein.
  
     0.466
AEG58356.1
PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter.
  
     0.455
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.