STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59128.1KEGG: cac:CA_C0449 hypothetical protein. (178 aa)    
Predicted Functional Partners:
AEG61153.1
PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
 
     0.704
AEG58778.1
KEGG: ttm:Tthe_0084 hypothetical protein.
  
     0.701
AEG60667.1
Sporulation protein YunB; KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like.
  
     0.674
AEG58850.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.646
AEG59820.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.602
AEG60604.1
KEGG: drm:Dred_1675 hypothetical protein.
  
     0.587
AEG62069.1
KEGG: drm:Dred_3295 hypothetical protein.
  
     0.585
AEG61152.1
KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
 
     0.580
AEG61821.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3069 PDZ/DHR/GLGF domain-containing protein.
  
     0.563
AEG61252.1
KEGG: drm:Dred_1093 hypothetical protein.
  
     0.526
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.