STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59193.1PFAM: SCP-like extracellular; KEGG: drm:Dred_1374 allergen V5/TPX-1 family protein. (249 aa)    
Predicted Functional Partners:
AEG61496.1
KEGG: dae:Dtox_1824 hypothetical protein.
   
    0.479
AEG61953.1
KEGG: drm:Dred_0966 hypothetical protein.
   
    0.479
AEG59247.1
KEGG: drm:Dred_2574 beta-lactamase domain-containing protein.
  
     0.430
AEG61952.1
PFAM: VanW family protein; KEGG: mta:Moth_0694 copper amine oxidase-like.
  
     0.430
AEG58775.1
PFAM: inner-membrane translocator; KEGG: pth:PTH_0460 ABC-type branched-chain amino acid transport system, permeasecomponent.
    
   0.416
AEG60532.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_1722 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.416
AEG60538.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2238 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.416
AEG60966.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2933 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.416
AEG61365.1
PFAM: VanW family protein; KEGG: drm:Dred_0777 VanW family protein.
  
     0.409
AEG61114.1
PFAM: VanW family protein; G5 domain protein; KEGG: drm:Dred_1178 VanW family protein.
  
     0.402
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.