STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59197.1KEGG: drm:Dred_2695 hypothetical protein. (309 aa)    
Predicted Functional Partners:
AEG58550.1
PFAM: polysaccharide biosynthesis protein CapD; KEGG: drm:Dred_0173 shikimate/quinate 5-dehydrogenase.
     0.983
AEG58464.1
KEGG: drm:Dred_0096 hypothetical protein.
  
     0.774
AEG61153.1
PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
  
     0.704
AEG61152.1
KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.648
AEG59404.1
PFAM: membrane protein of unknown function; KEGG: drm:Dred_2504 hypothetical protein.
  
     0.634
AEG60059.1
Acetylornithine transaminase; KEGG: drm:Dred_2058 aminotransferase class-III; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.591
AEG59196.1
KEGG: drm:Dred_2696 hypothetical protein.
       0.568
AEG61290.1
PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1067 hypothetical protein.
  
     0.568
AEG60196.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.541
AEG59128.1
KEGG: cac:CA_C0449 hypothetical protein.
  
     0.520
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.