STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59204.1PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_2688 2-hydroxyglutaryl-CoA dehydratase, D-component. (320 aa)    
Predicted Functional Partners:
AEG59205.1
KEGG: drm:Dred_2687 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
 0.988
AEG59203.1
TIGRFAM: methylaspartate ammonia-lyase; KEGG: drm:Dred_2689 methylaspartate ammonia-lyase; PFAM: methylaspartate ammonia-lyase.
 
     0.786
AEG59206.1
KEGG: drm:Dred_2686 beta-lactamase domain-containing protein.
       0.772
queE
Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
    0.750
AEG61013.1
TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: drm:Dred_1279 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
 0.699
AEG60464.1
KEGG: pth:PTH_1398 hypothetical protein.
  
     0.697
AEG59207.1
KEGG: drm:Dred_2685 hypothetical protein.
 
     0.681
AEG60469.1
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: drm:Dred_1754 putative 6-pyruvoyl tetrahydropterin synthase.
 
    0.680
glmE
Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
       0.675
AEG59201.1
KEGG: drm:Dred_2691 glutamate mutase, MutL.
       0.672
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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