STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59216.1PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein. (395 aa)    
Predicted Functional Partners:
AEG59214.1
Manually curated; PFAM: ABC transporter related; KEGG: drm:Dred_0318 ABC transporter related; SMART: AAA ATPase.
 
 0.991
AEG59215.1
KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein.
 
 
 0.987
AEG58907.1
KEGG: dae:Dtox_1572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.964
AEG60777.1
KEGG: bbe:BBR47_15070 probable ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.964
AEG59777.1
KEGG: drm:Dred_0318 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.963
AEG59778.1
KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.946
AEG60776.1
KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.937
AEG60913.1
KEGG: dhd:Dhaf_2148 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.863
AEG59217.1
KEGG: drm:Dred_0321 outer membrane protein-like protein.
  
 
 0.855
AEG58788.1
KEGG: cdl:CDR20291_0862 predicted abc transporter, atpase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.840
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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