STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59236.1KEGG: lxx:Lxx12220 integral membrane protein. (362 aa)    
Predicted Functional Partners:
AEG59747.1
PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_6008 major facilitator superfamily MFS_1.
  
     0.664
AEG61430.1
PFAM: protein of unknown function DUF161; KEGG: ddr:Deide_05570 hypothetical protein.
  
     0.456
AEG59106.1
KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
       0.454
AEG59237.1
KEGG: sso:SSO2973 quinol oxidase-2, subunit I/III, cytochrome aa3 (SoxM).
       0.425
AEG60666.1
PFAM: protein of unknown function DUF161; KEGG: aar:Acear_0727 protein of unknown function DUF161.
  
     0.401
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.