STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59252.1KEGG: tjr:TherJR_0417 ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)    
Predicted Functional Partners:
AEG59251.1
KEGG: mst:Msp_0959 polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 0.998
AEG59250.1
KEGG: tjr:TherJR_0419 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 0.994
AEG61481.1
KEGG: drm:Dred_0728 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.987
AEG58731.1
KEGG: drm:Dred_0742 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.958
AEG58517.1
KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; copper amine oxidase-like domain-containing protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 
 0.871
AEG58730.1
KEGG: drm:Dred_0743 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 
 0.870
AEG61482.1
KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 
 0.870
AEG60778.1
PFAM: protein of unknown function DUF214; KEGG: hmo:HM1_3093 hypothetical protein.
 
      0.651
AEG58908.1
PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein.
 
      0.634
AEG59106.1
KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
  
  
 0.577
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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