STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59256.1Regulatory protein ArsR; KEGG: pth:PTH_1733 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (95 aa)    
Predicted Functional Partners:
AEG59255.1
KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein.
  
  
 0.825
AEG59254.1
PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_2304 SirA family protein; Belongs to the sulfur carrier protein TusA family.
     
 0.730
AEG59253.1
KEGG: pth:PTH_1736 hypothetical protein.
       0.705
AEG60409.1
KEGG: drm:Dred_1528 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
   
 0.524
AEG59257.1
KEGG: drm:Dred_2572 hypothetical protein.
       0.519
AEG60474.1
KEGG: dae:Dtox_2078 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
 
  
 0.405
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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