STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG59257.1KEGG: drm:Dred_2572 hypothetical protein. (97 aa)    
Predicted Functional Partners:
AEG59255.1
KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein.
       0.519
AEG59256.1
Regulatory protein ArsR; KEGG: pth:PTH_1733 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
       0.519
AEG59258.1
PFAM: metallophosphoesterase; KEGG: drm:Dred_2571 metallophosphoesterase.
       0.509
AEG59259.1
PFAM: SMC domain protein; KEGG: drm:Dred_2570 SMC domain-containing protein.
       0.509
AEG59254.1
PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_2304 SirA family protein; Belongs to the sulfur carrier protein TusA family.
       0.486
AEG59253.1
KEGG: pth:PTH_1736 hypothetical protein.
       0.471
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.